| _atomIsInKernel | subDomain | [protected] |
| _indexInCut | subDomain | [protected] |
| _indexInKernel | subDomain | [protected] |
| _indexInOverlap | subDomain | [protected] |
| _indexOfNeighbors | subDomain | [protected] |
| _length | subDomain | [protected] |
| _localNum | subDomain | [protected] |
| _myNum | subDomain | [protected] |
| _numberOfAtoms | subDomain | [protected] |
| _numberOfAtomsCut | subDomain | [protected] |
| _numberOfAtomsKernel | subDomain | [protected] |
| _numberOfAtomsOverlap | subDomain | [protected] |
| _weight | subDomain | [protected] |
| _xmax | subDomain | [protected] |
| _xmin | subDomain | [protected] |
| addAtomsFromSubdomainInOverlapAndCut(const int &localOverlapSubDomain, subDomain &domain, const TYPEOFSYSTEM &atoms, const double &R_overlap, const double &R_cut, bool use_frag) | subDomain | |
| addAtomsInKernel(const setOfAtoms &atoms, bool use_frag) | subDomain | |
| addIndexInCut(const int &a, const int i) | subDomain | [inline] |
| addIndexInKernel(const int i) | subDomain | [inline] |
| addIndexInKernel(const int localNum, const int globalNum) | subDomain | [inline] |
| addIndexInOverlap(const int &a, const int i) | subDomain | [inline] |
| addNeigboors(const int num) | subDomain | [inline] |
| buildLocalNumerotation(const TYPEOFSYSTEM &atoms, std::vector< AtomIn > *atomsInZone) | subDomain | |
| computeNumberOfAtoms() | subDomain | |
| getAtomsIndexInCut(const int i) | subDomain | [inline] |
| getAtomsIndexInKernel() | subDomain | [inline] |
| getAtomsIndexInOverlap(const int i) | subDomain | [inline] |
| getAtomsIsInKernel() | subDomain | [inline] |
| getCentre(double *C) const | subDomain | [inline] |
| getLength(double *x) | subDomain | [inline] |
| getLocalNum() | subDomain | [inline] |
| getLocalNumberOfSundomain(const int num) const | subDomain | [inline] |
| getNeighboorsIndex() | subDomain | [inline] |
| getNumberOfAtoms() const | subDomain | [inline] |
| getNumberOfAtomsInCut() const | subDomain | [inline] |
| getNumberOfAtomsInCut(const int num) const | subDomain | [inline] |
| getNumberOfAtomsInKernel() const | subDomain | [inline] |
| getNumberOfAtomsInOverlap() const | subDomain | [inline] |
| getNumberOfAtomsInOverlap(const int num) const | subDomain | [inline] |
| getNumberOfNeighbor(const int i) const | subDomain | [inline] |
| getNumberOfNeighbors() const | subDomain | [inline] |
| getVolume() const | subDomain | [inline] |
| getXLength() const | subDomain | [inline] |
| getXmax(const int i) const | subDomain | [inline] |
| getXmax(const int i) | subDomain | [inline] |
| getXmax(double *x) | subDomain | [inline] |
| getXmin(const int i) const | subDomain | [inline] |
| getXmin(double *x) | subDomain | [inline] |
| getYLength() const | subDomain | [inline] |
| getZLength() const | subDomain | [inline] |
| initNumberOfOverlapDomain() | subDomain | |
| initNumberOfOverlapDomain(const int &) | subDomain | |
| load() const | subDomain | [inline] |
| loadInCut() const | subDomain | [inline] |
| loadInCut() | subDomain | [inline] |
| loadInKernel() const | subDomain | [inline] |
| loadInKernel() | subDomain | [inline] |
| loadInOverlap() const | subDomain | [inline] |
| loadInOverlap() | subDomain | [inline] |
| myNumber() const | subDomain | [inline] |
| myNumber() | subDomain | [inline] |
| numberOfAtomsInKernel() | subDomain | [inline] |
| removeNeigboors(std::vector< int > &list) | subDomain | |
| resetData() | subDomain | |
| setMyNumber(int num, const int nx, const int ny, const int nz) | subDomain | [inline] |
| setMyNumber(int num) | subDomain | [inline] |
| setNumberOfNeighbor(const int i, const int n) | subDomain | [inline] |
| setXmax(const double *x) | subDomain | [inline] |
| setXmin(const double &x) | subDomain | [inline] |
| setXmin(const double *x) | subDomain | [inline] |
| subDomain() | subDomain | |
| ~subDomain() | subDomain | |