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Isabelle Dutour
Publications
Journaux
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A. Ghozlane, F. Bringaud, H. Soueidan, I. Dutour, F. Jourdan and P. Thébault.
Flux Analysis of the Trypanosoma brucei Glycolysis Based on a Multiobjective-Criteria Bioinformatic Approach.
Advances in Bioinformatics, 2012:159423, 2012.
[PUBMED]
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R. Barriot, D. Sherman and I. Dutour.
How to decide which are the most pertinent overly-represented
features during gene set enrichment analysis.
BMC Bioinformatics, 8:332, 2007.
[PUBMED]
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R. Barriot, J. Poix, A. Groppi, A. Barré, N. Goffard, D. Sherman,
I. Dutour, and A. de Daruvar.
New strategy for the representation and the integration of
biomolecular knowledge at a cellular scale.
Nucleic Acids Research, 32(12):3581-3589, 2004.
[PUBMED]
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I. Dutour and J.-M. Fédou.
Object grammars and bijections.
Theoretical Computer Science, (3):1915-1929, 2003.
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A. Denise, I. Dutour, and P. Zimmermann.
CS: a MuPAD package for counting and randomly generating
combinatorial structures.
MathPAD, 8(1):23-30, March 1998.
(audience nationale)
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I. Dutour and J.-M. Fédou.
Object grammars and random generation.
Discrete Mathematics and Theoretical Computer Science,
2:49-63, 1998.
(http://www.dmtcs.org/dmtcs-ojs)
Abstract and Paper
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J.P. Dubernard and I. Dutour.
Enumération de polyominos convexes dirigés.
Discrete Mathematics, 157:79-90, 1996.
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M. Delest, J.P. Dubernard, and I. Dutour.
Parallelogram polyominoes and corners.
Journal of Symbolic Computation, 20:503-515, 1995.
Conférences
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J. Dubois, A. Ghozlane, P. Thébault, I. Dutour, and R. Bourqui.
Genome-wide detection of sRNA targets with rNAV.
Proc. in 3rd IEEE Symposium on Biological Data Visualization, Atlanta, USA, 13-14 October 2013.
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R. Barriot, J. Poix, A. Groppi, A. Barré, N. Goffard, D. Sherman,
I. Dutour, and A. de Daruvar.
New strategy for the representation and the integration of
biomolecular knowledge at a cellular scale.
Proc. in 5èmes Journées Ouvertes Biologie Informatique
Mathématiques - JOBIM, Montréal, Canada, 2004.
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G. Melançon, I. Dutour, and M. Bousquet-Mélou.
Random generation of directed acyclic graphs.
In Elsevier Science Publishers, editor, Comb01, Euroconference
on Combinatorics, Graph Theory and Applications, CRM, Bellaterra, Barcelona,
Spain, 2001.
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A. Denise, I. Dutour, and P. Zimmermann.
CS: a MuPAD package for counting and randomly generating
combinatorial structures.
Proc. in the 10th conference Formal Power Series and
Algebraic Combinatorics, June 1998. (Software Demonstration)
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J.-P. Dubernard and I. Dutour.
Enumération de polyominos convexes dirigés.
In DIMACS, editor, Proceedings of the 6th conference Formal
Power Series and Algebraic Combinatorics, pages 109-118, Rutgers
University, USA, May 1994.
Posters
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J. Dubois, A. Ghozlane, P. Thébault, I. Dutour, and R. Bourqui.
A visualization approach to analyse bacterial sRNA-mediated regulatory networks.
Proc. in 14èmes Journées Ouvertes Biologie Informatique
Mathématiques - JOBIM, Toulouse, France, 2013.
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R. Barriot, D. Sherman and I. Dutour.
A formal approach for finding the most pertinent
over-represented features during gene set enrichment analysis.
In Benelux BioInformatics Conference (BBC), Leuven, Belgique, 2007.
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R. Barriot, D. Sherman and I. Dutour.
Improving Guild-By-Association methods
for heterogeneous biological data confrontation.
In BioScope-IT, Gand, Belgique, 2006.
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R. Barriot, D. Sherman and I. Dutour.
Improving Guild-By-Association methods for a better confrontation
of heterogeneous biological data.
In Benelux BioInformatics Conference (BBC), Wageningen, Pays-Bas, 2006.
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C. Gaugain, R. Barriot, A. Barré, A. Groppi, I. Dutour,
and A. de Daruvar.
Finding the best knowledge representation for heterogeneous data
integration.
In 7èmes Journées Ouvertes Biologie Informatique
Mathématiques - JOBIM, Bordeaux, France, 2006.
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R. Barriot, I. Dutour, and D. Sherman.
Efficient generation of pertinent target sets for the blastsets
system.
In 6èmes Journées Ouvertes Biologie Informatique
Mathématiques - JOBIM, Lyon, France, 2005.
Thèse et DEA
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I. Dutour.
Grammaires d'objets : énumération, bijections et
génération aléatoire.
PhD thesis, Université Bordeaux 1, January 1996.
Abstract -
Postscript.gz
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I. Dutour.
Animaux dirigés 3D et approximations de séries génératrices.
Mémoire de DEA, Université Bordeaux 1, June 1992.
Lien
Rapports internes / Soumissions
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R. Barriot, D. Sherman and I. Dutour.
How to decide which are the most pertinent overly-represented
features during gene set enrichment analysis.
Rapport interne LaBRI RR-142006, 2006.
Abstract -
Pdf.gz
Collaborations en Astrophysique
Journaux
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M. Dobrijevic and I. Dutour.
The distribution of hydrocarbons in Titan's atmosphere: an evolutionary algorithm-based model.
Planetary and Space Science, 55:2128-2136, 2007.
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M. Dobrijevic and I. Dutour.
A random graph model for the study of chemical complexity in planetary atmospheres.
Planetary and Space Science, 54:287-295, 2006.
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M. Dobrijevic, J.-P. Parisot, and I. Dutour.
Study of chemical systems using the signal flow graph theory: Application to Neptune.
Planetary and Space Science, 43:15-24, 1995.
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M. Dobrijevic, J.-P. Parisot, and I. Dutour.
Study of chemical systems using the signal flow graph theory.
Advances in Space Research, 16(2):105-108, 1995.